ParameterizedFunctions.jl: Simple High-Level ODE Definitions
ParameterizedFunctions.jl is a component of the SciML ecosystem which allows for easily defining parameterized ODE models in a simple syntax.
Installation
To install ParameterizedFunctions.jl, use the Julia package manager:
using Pkg
Pkg.add("ParameterizedFunctions")
Example
using DifferentialEquations, ParameterizedFunctions
# Non-Stiff ODE
lotka_volterra = @ode_def begin
d🐁 = α * 🐁 - β * 🐁 * 🐈
d🐈 = -γ * 🐈 + δ * 🐁 * 🐈
end α β γ δ
p = [1.5, 1.0, 3.0, 1.0];
u0 = [1.0; 1.0];
prob = ODEProblem(lotka_volterra, u0, (0.0, 10.0), p)
sol = solve(prob, Tsit5(), reltol = 1e-6, abstol = 1e-6)
# Stiff ODE
rober = @ode_def begin
dy₁ = -k₁ * y₁ + k₃ * y₂ * y₃
dy₂ = k₁ * y₁ - k₂ * y₂^2 - k₃ * y₂ * y₃
dy₃ = k₂ * y₂^2
end k₁ k₂ k₃
prob = ODEProblem(rober, [1.0, 0.0, 0.0], (0.0, 1e5), [0.04, 3e7, 1e4])
sol = solve(prob)
Latex
Latexify directly works on the generated expression. Example:
using ParameterizedFunctions, Latexify
lotka_volterra = @ode_def begin
dx = a * x - b * x * y
dy = -c * y + d * x * y
end a b c d
latexify(lotka_volterra.sys)
Generates:
L"\begin{align}
\frac{\mathrm{d} x\left( t \right)}{\mathrm{d}t} =& a x\left( t \right) - b x\left( t \right) y\left( t \right) \\
\frac{\mathrm{d} y\left( t \right)}{\mathrm{d}t} =& - c y\left( t \right) + d x\left( t \right) y\left( t \right)
\end{align}
"`
Contributing
Please refer to the SciML ColPrac: Contributor's Guide on Collaborative Practices for Community Packages for guidance on PRs, issues, and other matters relating to contributing to SciML.
See the SciML Style Guide for common coding practices and other style decisions.
There are a few community forums:
- The #diffeq-bridged and #sciml-bridged channels in the Julia Slack
- The #diffeq-bridged and #sciml-bridged channels in the Julia Zulip
- On the Julia Discourse forums
- See also SciML Community page
Reproducibility
The documentation of this SciML package was built using these direct dependencies,
Status `~/work/ParameterizedFunctions.jl/ParameterizedFunctions.jl/docs/Project.toml`
[e30172f5] Documenter v1.11.4
[65888b18] ParameterizedFunctions v5.18.0 `~/work/ParameterizedFunctions.jl/ParameterizedFunctions.jl`
and using this machine and Julia version.
Julia Version 1.11.5
Commit 760b2e5b739 (2025-04-14 06:53 UTC)
Build Info:
Official https://julialang.org/ release
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: 4 × AMD EPYC 7763 64-Core Processor
WORD_SIZE: 64
LLVM: libLLVM-16.0.6 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)
A more complete overview of all dependencies and their versions is also provided.
Status `~/work/ParameterizedFunctions.jl/ParameterizedFunctions.jl/docs/Manifest.toml`
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