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Introduction to Machine Learning in R

Last Updated : 12 Jun, 2025
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Machine learning in R allows data scientists, analysts and statisticians to build predictive models, uncover patterns and gain insights using powerful statistical techniques combined with modern machine learning algorithms. R provides a comprehensive environment with numerous built-in functions and dedicated packages to handle the entire machine learning workflow from data preparation and model building to evaluation and visualization. With its rich ecosystem of libraries and its strong foundation in statistics, R is a highly effective tool for implementing machine learning solutions directly within the R programming environment.

introduction_to_machine_learning_1
Introduction to Machine Learning

How Machine Learning Works in R

The basic steps involved in a machine learning project using R include:

  1. Data Cleaning: Use packages like tidyverse and dplyr to clean and prepare the data.
  2. Algorithm Selection: Choose algorithms available in R packages such as caret, randomForest, e1071, nnet and many others.
  3. Model Training: Train models using R functions like train() from the caret package or specific model functions like lm(), glm(), or rpart().
  4. Prediction: Make predictions using predict() functions on the trained models.
  5. Evaluation: Evaluate model performance using metrics provided by packages like caret, yardstick and visualization packages like ggplot2.

Classification Of Machine Learning in R

Machine learning implementations are classified into 3 major categories, depending on the nature of learning.

1. Supervised Learning in R

Supervised learning we try to teach the machine with the data using labels and which already have the correct answer in it. After this, the machine will create an example set of data so that the supervised algorithm analyses the training data and produce the correct output of the labeled data. In R supervised learning involves training models with labeled data using R's vast set of packages and built-in functions.

Example: You can use the rpart package to create a decision tree model to classify fruits based on attributes like color and shape.

Supervised-learning
Supervised Learning

Packages and Functions:

  • caret : train()
  • rpart : rpart()
  • e1071 : svm()
  • nnet : multinom()

Types of Supervised Learning

  • Classification: Predicts categories (e.g., spam or not spam) using logistic regression (glm() with family=binomial), decision trees (rpart()), or random forests (randomForest()).
  • Regression: Predicts continuous outcomes (e.g., house prices) using functions like lm() or caret : train() with regression models.

2. Unsupervised Learning in R

Unsupervised learning is the training of machines using information that is not labeled and it works without any guidance. Here the main task of the machine is to separate the data using the similarities, differences and patterns without any prior supervision. Hence unsupervised learning is performed on unlabeled data where the model identifies patterns and structures on its own.

Example:

  • Use kmeans() to group customers into clusters based on their similarity in features like age, income, or spending habits. Each cluster represents customers who share common patterns.
  • Use agnes() for hierarchical clustering, which builds a tree-like structure showing how groups of similar customers are progressively merged based on their similarity
Unsupervised-learning
Unsupervised Learning

Packages and Functions:

  • stats : kmeans()
  • cluster : agnes()
  • factoextra for visualizing clusters
  • arules : apriori() for association rule mining

Types of Unsupervised Learning:

  • Clustering: Grouping similar data points using kmeans() or hierarchical clustering.
  • Association: Finding rules with arules : apriori() to identify co-occurring items.

3. Reinforcement Learning in R

The reinforcement learning method is all about taking suitable action to maximize reward in a particular situation. While reinforcement learning is not as heavily supported as supervised and unsupervised learning, R still offers packages such as ReinforcementLearning for basic implementations.

Example: Use the ReinforcementLearning package to train an agent for optimal decision-making based on reward feedback.

Reinforcement-Learning_
Reinforcement Learning

Some main points in reinforcement learning:

  • Input: Initial environment state.
  • Output: Possible actions.
  • Training: Learn policies based on reward signals.

Types of Machine Learning Problems in R

  • Regression: Used to predict continuous numeric values based on input data. Example: Predicting house prices based on area, location and amenities using lm() or caret : train().
  • Classification: Assigns inputs into predefined categories or classes. Example: Classifying emails as "spam" or "not spam" using randomForest() or svm().
  • Clustering: Groups similar data points together based on patterns in the data. Example: Segmenting patients based on their medical readings using kmeans() or agnes().
  • Association: Identifies relationships between items or events that frequently occur together. Example: Market basket analysis to find items often bought together using apriori().
  • Anomaly Detection: Detects unusual or abnormal patterns in data. Example: Identifying fraudulent credit card transactions using anomalize.
  • Sequence Mining: Discovers patterns in sequential data. Example: Predicting next webpage clicks in a user's browsing session using TraMineR.
  • Recommendation: Suggests items to users based on their behavior or preferences. Example: Recommending movies or songs based on past user interactions using recommenderlab.
  • caret: Unified interface for model training and evaluation.
  • randomForest: Implements Random Forest algorithms.
  • e1071: Support Vector Machines (SVM), Naive Bayes, etc.
  • xgboost: Gradient boosting machine learning.
  • glmnet: Regularized regression (LASSO, Ridge).
  • rpart: Decision tree models.
  • DataExplorer: Automates exploratory data analysis.
  • Dalex: Model explanations.
  • dplyr and janitor: Data cleaning and transformation.
  • ggplot2: Data visualization.

Example of Machine Learning Applications in R

  • Web search: like Siri, Alexa, Google, Cortona: Recognize the user's voice and fulfill the request made
  • Social Media Service: Help people to connect all over the world and also show the recommendations of the people we may know
  • Online Customer Support: Provide high convenience of customer and efficiency of support agent
  • Intelligent Gaming: Use high level responsive and adaptive non player characters similar to human like intelligence
  • Product Recommendation: A software tool used to recommend the product that you might like to purchase or engage with
  • Virtual Personal Assistance: It is the software which can perform the task according to the instructions provided
  • Traffic Alerts: Help to switch the traffic alerts according to the situation provided
  • Online Fraud Detection: Check the unusual functions performed by the user and detect the frauds
  • Healthcare: Machine Learning can manage a large amount of data beyond the imagination of normal human being and help to identify the illness of the patient according to symptoms
  • Real world example: When you search for some kind of cooking recipe on youtube, you will see the recommendations below with the title "You May Also Like This". This is a common use of Machine Learning.

Advantages to Implement Machine Learning Using R

  • Concise, readable and expressive code.
  • Powerful statistical modeling capabilities.
  • Extensive package ecosystem for every ML stage.
  • Superior data visualization options.
  • Active community support and documentation.

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