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International Journal of Trend in Scientific Research and Development (IJTSRD)
Volume 4 Issue 3, April 2020 Available Online: www.ijtsrd.com e-ISSN: 2456 – 6470
@ IJTSRD | Unique Paper ID – IJTSRD30316 | Volume – 4 | Issue – 3 | March-April 2020 Page 204
MRI Brain Image Segmentation using
Fuzzy Clustering Algorithms
Pavithra. R1, E. Sivaraman2
1PG Student, 2Associate Professor,
1,2Department of Electronics and Communication Engineering,
1,2Government College of Engineering, Tirunelveli, Tamil Nadu, India
ABSTRACT
MR image segmentation assumes a significant job and a significant job in the
restorative field because of its assortment of utilizations particularly in Brain
tumor investigation. Cerebrum tumor is an unusual and uncontrolled
development of cells. It occupies room inside the skull. It can pack, move and
damage solid cerebrum tissue and nerves. Additionally as a rule it deter with
ordinary mind work. Tumors can be kindhearted (non-dangerous) or
threatening (malignant), can occur in various pieces of the cerebrum.
Cerebrum tumor arrangement and ID from Magnetic Resonance (MR)
information is a fundamental. However, it requires some serious energy and
manual errand finished by restorative pros. Mechanizing thisundertakingisa
difficult due to the high assortment in the vibe of tumortissuesamongvarious
patients and by and large similitude with the ordinary tissues. Right now,
tumor picture has been portioned utilizing proposed Fuzzy grouping
calculation (FCM). The presentation ofFCMdivisionstrategyiscontrastedand
those of watershed and SVM calculations.
KEYWORDS: Magnetic Resonance Imaging (MRI), Segmentation, Watershed,
SVM, FCM
How to cite this paper: Pavithra. R | E.
Sivaraman "MRI Brain Image
Segmentation using Fuzzy Clustering
Algorithms"
Published in
International Journal
of Trend in Scientific
Research and
Development
(ijtsrd), ISSN: 2456-
6470, Volume-4 |
Issue-3, April 2020, pp.204-206, URL:
www.ijtsrd.com/papers/ijtsrd30316.pdf
Copyright © 2020 by author(s) and
International Journal ofTrendinScientific
Research and Development Journal. This
is an Open Access article distributed
under the terms of
the Creative
CommonsAttribution
License (CC BY 4.0)
(http://creativecommons.org/licenses/by
/4.0)
I. INTRODUCTION
A Cerebrum tumor happens when irregular cells structure
inside the cerebrum. There are two fundamental kinds of
tumors: carcinogenic (harmful) tumors and generous (non-
destructive) tumors. Dangerous tumors can be isolated into
essential tumors, which start inside the mind, and auxiliary
tumors, which have spread from somewhere else, known as
cerebrum metastasis tumors. A wide range of cerebrum
tumors may create side effects that change contingent upon
the piece of the mind in question. These side effects may
incorporate cerebral pains, seizures, issues with vision,
retching and mental changes. The migraine is traditionally
more terrible toward the beginning of the day and leaves
with spewing. Different side effects may incorporatetrouble
strolling, talking or with sensations. As the infection,
advances obviousness may happen.
II. RELATED WORKS
In past image segmentation strategies, limit based
segmentation is an essential strategy. The technique is basic
and has favorable circumstancesinhandlingspeed;however
it isn't reasonable for the segmentation of obscured limit
territories in image. Fuzzy C-implies Clustering (FCM)
calculation is one of the most old style fuzzy bunching
calculations, which scans for the ideal boundaries through
rehashed emphases. Since the Euclidean separation is
utilized as the separation measure in the target capacity of
FCM calculation, the examples near one another in the
example space will be bunched together. Bunching
examination generally relies upon the dissemination of
informational indexes.
III. PROPOSED METHOD
Fig 1.System Architecture
IJTSRD30316
MRI Input Image
Pre-Processing Using
Wiener Filter
Segmentation
FCM Algorithm
Comparative Analysis
SVM Algorithm
Watershed Algorithm
International Journal of Trend in Scientific Research and Development (IJTSRD) @ www.ijtsrd.com eISSN: 2456-6470
@ IJTSRD | Unique Paper ID – IJTSRD30316 | Volume – 4 | Issue – 3 | March-April 2020 Page 205
A. Pre-Processing
Parametric Description
The exhibition parameters are most significant criteria to
legitimize the reenactment results. Peak signal tonoise ratio
(PSNR) and mean square error (MSE) are viewed as
parameters. The nature of denoised picture is estimated by
PSNR = 10 (1)
Where is maximum value of pixel present in an image
and MSE is the mean square error between original and
denoised image with M*N size.
MSE = . (2)
B. Segmentation
MR image segmentation is the most fundamental and
significant piece of picture handlingwhichportionsa picture
into important territories as per a few attributes, for
example, dark level, range, surface, shading, etc. The
objective of image segmentation is to segment a picture into
a lot of disjoint districts with uniform and homogeneous
qualities, for example, force, shading, tone or surface and so
on.
C. Watershed segmentation method
The watershed based techniques utilizes the idea of
topological translation. Right now speaks to the bowls
having gap in its minima from where the water spills. At the
point when water arrives at the outskirt of bowl the
contiguous bowls are consolidated. To keep up detachment
between bowls dams are required and are the fringes of
district of division. These dams are built utilizing widening.
The watershed strategies think about the inclination of
picture as topographic surface. The pixels having more
angles are spoken to as limits which are nonstop.
D. SVM Techniques
SVM or Support Vector Machine is a direct model for
grouping and relapse issues. It can take care of straight and
non-direct issues and function admirably for some
commonsense issues. The possibility of SVM is
straightforward: The calculation makes a line or a
hyperplane which isolates the information into classes.
E. Fuzzy C-Means algorithm
Fuzzy grouping is a type of bunching where every datum
point can have a place with more than one bunch. Bunching
or group investigation includes appointing information
focuses to groups with the end goal that things in a similar
bunch are as comparative as could be expected under the
circumstances, while things having a place with various
bunches are as unique as could be expected under the
circumstances. Bunches are distinguished by means of
comparability measures. These closeness measures
incorporate separation, network, and force.Diverselikeness
measures might be picked dependent on the information or
the application.
IV. RESULTS AND DISCUSSION
The unwanted noise present in the brain MR imagehasbeen
eliminated by using the wiener filter.
Table1. Filtered MR brain images
Table2. PSNR values of sample images
S. NO IMAGE MSE PSNR (dB)
1 Sample Image 1 7.74 39.2774
2 Sample Image 2 4.44 41.6938
3 Sample Image 3 3.86 42.2955
Table3. Segmented MR brain images (Watershed)
International Journal of Trend in Scientific Research and Development (IJTSRD) @ www.ijtsrd.com eISSN: 2456-6470
@ IJTSRD | Unique Paper ID – IJTSRD30316 | Volume – 4 | Issue – 3 | March-April 2020 Page 206
Table4. Segmented MR brain images (SVM)
Table 5.Segmented MR brain images (FCM)
Table6. Performance Analysis
Algorithm
Computation
Time(Seconds)
DSC
Values
Watershed 0.0624 0.3692
SVM 0.0356 0.3483
FCM 0.0156 0.1527
FCM Algorithm produces better result compared with those
of Watershed and SVM Algorithms in terms of computation
time and DSC values.
V. CONCLUSION
MR image has been done utilizing Wiener channel. The
division has been finished byusingWatershed,SVMandFCM
Algorithms. The presentation of FCM has been contrasted
and those of Watershed and SVM Algorithms. From the
outcome is evident that FCM Algorithm delivers better
outcome contrasted and those of Watershed and SVM
Algorithms as far as calculation time and DSC values.
REFERENCES
[1] Roerdink, J. B. and Meijster, A., 2000. The watershed
transform: Definitions, algorithms and parallelization
strategies. Fundamenta informaticae, 41(1, 2), pp.187-
228.
[2] Glasbey, C. A. and Horgan, G. W., 1995. Image analysis
for the biological sciences (Vol. 1). Chichester: Wiley.
[3] Shafarenko, L., Petrou, M. and Kittler, J., 1997.
Automatic watershed segmentation of randomly
textured color images. IEEE transactions on Image
Processing, 6(11), pp.1530-1544.
[4] Gonzalez, RC and Woods, RE, 2002. Digital image
processing.
[5] Dokládal, P., Urtasun, R., Bloch, I. and Garnero,L.,2001,
October. Segmentation of 3D head MR images using
morphological reconstruction under constraints and
automatic selection of markers. In Proceedings 2001
International Conference on Image Processing (Cat. No.
01CH37205) (Vol. 3, pp. 1075-1078). IEEE.
[6] Pratt, W.K., 2013. Introduction to digital image
processing. CRC press.
[7] Clark, M. C., Hall, L. O., Goldgof, D. B., Velthuizen, R.,
Murtagh, F.R. and Silbiger, M.S.,1998.Automatictumor
segmentationusingknowledge-basedtechniques. IEEE
transactions on medical imaging, 17(2), pp.187-201.
[8] LIU, Y. T., Zhang, H. X. and Li, P. H., 2011. Research on
SVM-based MRI image segmentation. The Journal of
China Universities of Posts and Telecommunications, 18,
pp.129-132.
[9] Guo, L., Liu, X., Wu, Y., Yan, W. and Shen, X., 2007,
August. Research on the segmentation of MRI image
based on multi-classification support vector machine.
In 2007 29th Annual International Conference of the
IEEE Engineering in Medicine and Biology Society (pp.
6019-6022). IEEE.
[10] Xiao, J. and Tong, Y., 2014, May. Research of Brain MRI
image segmentation algorithm basedonFCMandSVM.
In The 26th Chinese Control and Decision Conference
(2014 CCDC) (pp. 1712-1716). IEEE.
[11] Kasiri, K., Kazemi, K., Dehghani, M. J. and Helfroush,
M.S., 2010, July. Atlas-based segmentation of brain MR
images using least square support vector machines.
In 2010 2nd International Conference on Image
Processing Theory, Tools and Applications (pp. 306-
310). IEEE.
[12] Ruan, S., Lebonvallet, S., Merabet, A. andConstans,J.M.,
2007, April. Tumor segmentation from a multispectral
MRI images by using support vector machine
classification. In 2007 4th IEEE International
Symposium on Biomedical Imaging: From Nano to
Macro (pp. 1236-1239). IEEE.
[13] Sudhakar, B. and Veluthai, M., Brain Tumor
Segmentation of MRI Image using Gustaffson-Kessel
(GK) Fuzzy Clustering Algorithm.
[14] Xess, M. and Agnes, S. A., 2014. Analysis of image
segmentation methods based on performance
evaluation parameters. Int J Comput Eng Res, 4(3),
pp.68-75.
[15] Zhang, Y. J., 1996. A survey on evaluation methods for
image segmentation. Pattern recognition, 29(8),
pp.1335-1346.

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MRI Brain Image Segmentation using Fuzzy Clustering Algorithms

  • 1. International Journal of Trend in Scientific Research and Development (IJTSRD) Volume 4 Issue 3, April 2020 Available Online: www.ijtsrd.com e-ISSN: 2456 – 6470 @ IJTSRD | Unique Paper ID – IJTSRD30316 | Volume – 4 | Issue – 3 | March-April 2020 Page 204 MRI Brain Image Segmentation using Fuzzy Clustering Algorithms Pavithra. R1, E. Sivaraman2 1PG Student, 2Associate Professor, 1,2Department of Electronics and Communication Engineering, 1,2Government College of Engineering, Tirunelveli, Tamil Nadu, India ABSTRACT MR image segmentation assumes a significant job and a significant job in the restorative field because of its assortment of utilizations particularly in Brain tumor investigation. Cerebrum tumor is an unusual and uncontrolled development of cells. It occupies room inside the skull. It can pack, move and damage solid cerebrum tissue and nerves. Additionally as a rule it deter with ordinary mind work. Tumors can be kindhearted (non-dangerous) or threatening (malignant), can occur in various pieces of the cerebrum. Cerebrum tumor arrangement and ID from Magnetic Resonance (MR) information is a fundamental. However, it requires some serious energy and manual errand finished by restorative pros. Mechanizing thisundertakingisa difficult due to the high assortment in the vibe of tumortissuesamongvarious patients and by and large similitude with the ordinary tissues. Right now, tumor picture has been portioned utilizing proposed Fuzzy grouping calculation (FCM). The presentation ofFCMdivisionstrategyiscontrastedand those of watershed and SVM calculations. KEYWORDS: Magnetic Resonance Imaging (MRI), Segmentation, Watershed, SVM, FCM How to cite this paper: Pavithra. R | E. Sivaraman "MRI Brain Image Segmentation using Fuzzy Clustering Algorithms" Published in International Journal of Trend in Scientific Research and Development (ijtsrd), ISSN: 2456- 6470, Volume-4 | Issue-3, April 2020, pp.204-206, URL: www.ijtsrd.com/papers/ijtsrd30316.pdf Copyright © 2020 by author(s) and International Journal ofTrendinScientific Research and Development Journal. This is an Open Access article distributed under the terms of the Creative CommonsAttribution License (CC BY 4.0) (http://creativecommons.org/licenses/by /4.0) I. INTRODUCTION A Cerebrum tumor happens when irregular cells structure inside the cerebrum. There are two fundamental kinds of tumors: carcinogenic (harmful) tumors and generous (non- destructive) tumors. Dangerous tumors can be isolated into essential tumors, which start inside the mind, and auxiliary tumors, which have spread from somewhere else, known as cerebrum metastasis tumors. A wide range of cerebrum tumors may create side effects that change contingent upon the piece of the mind in question. These side effects may incorporate cerebral pains, seizures, issues with vision, retching and mental changes. The migraine is traditionally more terrible toward the beginning of the day and leaves with spewing. Different side effects may incorporatetrouble strolling, talking or with sensations. As the infection, advances obviousness may happen. II. RELATED WORKS In past image segmentation strategies, limit based segmentation is an essential strategy. The technique is basic and has favorable circumstancesinhandlingspeed;however it isn't reasonable for the segmentation of obscured limit territories in image. Fuzzy C-implies Clustering (FCM) calculation is one of the most old style fuzzy bunching calculations, which scans for the ideal boundaries through rehashed emphases. Since the Euclidean separation is utilized as the separation measure in the target capacity of FCM calculation, the examples near one another in the example space will be bunched together. Bunching examination generally relies upon the dissemination of informational indexes. III. PROPOSED METHOD Fig 1.System Architecture IJTSRD30316 MRI Input Image Pre-Processing Using Wiener Filter Segmentation FCM Algorithm Comparative Analysis SVM Algorithm Watershed Algorithm
  • 2. International Journal of Trend in Scientific Research and Development (IJTSRD) @ www.ijtsrd.com eISSN: 2456-6470 @ IJTSRD | Unique Paper ID – IJTSRD30316 | Volume – 4 | Issue – 3 | March-April 2020 Page 205 A. Pre-Processing Parametric Description The exhibition parameters are most significant criteria to legitimize the reenactment results. Peak signal tonoise ratio (PSNR) and mean square error (MSE) are viewed as parameters. The nature of denoised picture is estimated by PSNR = 10 (1) Where is maximum value of pixel present in an image and MSE is the mean square error between original and denoised image with M*N size. MSE = . (2) B. Segmentation MR image segmentation is the most fundamental and significant piece of picture handlingwhichportionsa picture into important territories as per a few attributes, for example, dark level, range, surface, shading, etc. The objective of image segmentation is to segment a picture into a lot of disjoint districts with uniform and homogeneous qualities, for example, force, shading, tone or surface and so on. C. Watershed segmentation method The watershed based techniques utilizes the idea of topological translation. Right now speaks to the bowls having gap in its minima from where the water spills. At the point when water arrives at the outskirt of bowl the contiguous bowls are consolidated. To keep up detachment between bowls dams are required and are the fringes of district of division. These dams are built utilizing widening. The watershed strategies think about the inclination of picture as topographic surface. The pixels having more angles are spoken to as limits which are nonstop. D. SVM Techniques SVM or Support Vector Machine is a direct model for grouping and relapse issues. It can take care of straight and non-direct issues and function admirably for some commonsense issues. The possibility of SVM is straightforward: The calculation makes a line or a hyperplane which isolates the information into classes. E. Fuzzy C-Means algorithm Fuzzy grouping is a type of bunching where every datum point can have a place with more than one bunch. Bunching or group investigation includes appointing information focuses to groups with the end goal that things in a similar bunch are as comparative as could be expected under the circumstances, while things having a place with various bunches are as unique as could be expected under the circumstances. Bunches are distinguished by means of comparability measures. These closeness measures incorporate separation, network, and force.Diverselikeness measures might be picked dependent on the information or the application. IV. RESULTS AND DISCUSSION The unwanted noise present in the brain MR imagehasbeen eliminated by using the wiener filter. Table1. Filtered MR brain images Table2. PSNR values of sample images S. NO IMAGE MSE PSNR (dB) 1 Sample Image 1 7.74 39.2774 2 Sample Image 2 4.44 41.6938 3 Sample Image 3 3.86 42.2955 Table3. Segmented MR brain images (Watershed)
  • 3. International Journal of Trend in Scientific Research and Development (IJTSRD) @ www.ijtsrd.com eISSN: 2456-6470 @ IJTSRD | Unique Paper ID – IJTSRD30316 | Volume – 4 | Issue – 3 | March-April 2020 Page 206 Table4. Segmented MR brain images (SVM) Table 5.Segmented MR brain images (FCM) Table6. Performance Analysis Algorithm Computation Time(Seconds) DSC Values Watershed 0.0624 0.3692 SVM 0.0356 0.3483 FCM 0.0156 0.1527 FCM Algorithm produces better result compared with those of Watershed and SVM Algorithms in terms of computation time and DSC values. V. CONCLUSION MR image has been done utilizing Wiener channel. The division has been finished byusingWatershed,SVMandFCM Algorithms. The presentation of FCM has been contrasted and those of Watershed and SVM Algorithms. From the outcome is evident that FCM Algorithm delivers better outcome contrasted and those of Watershed and SVM Algorithms as far as calculation time and DSC values. REFERENCES [1] Roerdink, J. B. and Meijster, A., 2000. The watershed transform: Definitions, algorithms and parallelization strategies. Fundamenta informaticae, 41(1, 2), pp.187- 228. [2] Glasbey, C. A. and Horgan, G. W., 1995. Image analysis for the biological sciences (Vol. 1). Chichester: Wiley. [3] Shafarenko, L., Petrou, M. and Kittler, J., 1997. Automatic watershed segmentation of randomly textured color images. IEEE transactions on Image Processing, 6(11), pp.1530-1544. [4] Gonzalez, RC and Woods, RE, 2002. Digital image processing. [5] Dokládal, P., Urtasun, R., Bloch, I. and Garnero,L.,2001, October. Segmentation of 3D head MR images using morphological reconstruction under constraints and automatic selection of markers. In Proceedings 2001 International Conference on Image Processing (Cat. No. 01CH37205) (Vol. 3, pp. 1075-1078). IEEE. [6] Pratt, W.K., 2013. Introduction to digital image processing. CRC press. [7] Clark, M. C., Hall, L. O., Goldgof, D. B., Velthuizen, R., Murtagh, F.R. and Silbiger, M.S.,1998.Automatictumor segmentationusingknowledge-basedtechniques. IEEE transactions on medical imaging, 17(2), pp.187-201. [8] LIU, Y. T., Zhang, H. X. and Li, P. H., 2011. Research on SVM-based MRI image segmentation. The Journal of China Universities of Posts and Telecommunications, 18, pp.129-132. [9] Guo, L., Liu, X., Wu, Y., Yan, W. and Shen, X., 2007, August. Research on the segmentation of MRI image based on multi-classification support vector machine. In 2007 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (pp. 6019-6022). IEEE. [10] Xiao, J. and Tong, Y., 2014, May. Research of Brain MRI image segmentation algorithm basedonFCMandSVM. In The 26th Chinese Control and Decision Conference (2014 CCDC) (pp. 1712-1716). IEEE. [11] Kasiri, K., Kazemi, K., Dehghani, M. J. and Helfroush, M.S., 2010, July. Atlas-based segmentation of brain MR images using least square support vector machines. In 2010 2nd International Conference on Image Processing Theory, Tools and Applications (pp. 306- 310). IEEE. [12] Ruan, S., Lebonvallet, S., Merabet, A. andConstans,J.M., 2007, April. Tumor segmentation from a multispectral MRI images by using support vector machine classification. In 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro (pp. 1236-1239). IEEE. [13] Sudhakar, B. and Veluthai, M., Brain Tumor Segmentation of MRI Image using Gustaffson-Kessel (GK) Fuzzy Clustering Algorithm. [14] Xess, M. and Agnes, S. A., 2014. Analysis of image segmentation methods based on performance evaluation parameters. Int J Comput Eng Res, 4(3), pp.68-75. [15] Zhang, Y. J., 1996. A survey on evaluation methods for image segmentation. Pattern recognition, 29(8), pp.1335-1346.